This work details the theory and implementation of a multi-wavelength quantum key distribution (QKD) emulation system with a physical unclonable function (PUF). Multi-wavelength QKD can eliminate the need to share a subsection of the final key for eavesdropper detection and allow for ternary and quaternary data transmission. The inclusion of the PUF adds an additional layer of security. https://www.jmannino.com/